BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019E09LP1|AL427498
(426 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1530 768 0.0
3x_Contig130 149 4e-36
>3x_Contig1530
Length = 6216
Score = 768 bits (381), Expect = 0.0
Identities = 411/427 (96%), Gaps = 1/427 (0%)
Strand = Plus / Minus
Query: 1 aaawgtacacgttcaattaagcaacaaggacttcttacatatgtaaagtatgagaatagg 60
||| || ||||||||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 3134 aaatgtccacgttcaattaagcaacaaggacttcttacatatttaaagtttgagaatagg 3075
Query: 61 tcaaggtcatttcaaccccggtacctctaatcattckctttacctcataaaactgatacg 120
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 3074 tcaaggtcatttcaaccccggtacctctaatcattcgctttacctcataaaactgatacg 3015
Query: 121 agcttctkctatcctgagggaaacttcggcakgaaccagctactagatkgttckattakt 180
||||||| ||||||||||||||||||||||| |||||||||||||||| |||| |||| |
Sbjct: 3014 agcttctgctatcctgagggaaacttcggcaggaaccagctactagatggttcgattagt 2955
Query: 181 ctttckcccctatacccaaattcgacgatcgatttgcacgtcagaaccgctacgagcctc 240
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2954 ctttcgcccctatacccaaattcgacgatcgatttgcacgtcagaaccgctacgagcctc 2895
Query: 241 caccagagtttcctctggcttcaccctattcaggcatagttcaccatctttcgggtccca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2894 caccagagtttcctctggcttcaccctattcaggcatagttcaccatctttcgggtccca 2835
Query: 301 acagctatgctcttactcaaatccatccgaagacatcaggatcggtcgatkatkcaccct 360
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 2834 acagctatgctcttactcaaatccatccgaagacatcaggatcggtcgatgatgcaccct 2775
Query: 361 tgcgggccctcacctackttcactttcattacgcgtacgggttttata-ccaaacactcg 419
||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||
Sbjct: 2774 tgcgggccctcacctacgttcactttcattacgcgtacgggttttacacccaaacactcg 2715
Query: 420 catagac 426
|||||||
Sbjct: 2714 catagac 2708
>3x_Contig130
Length = 115
Score = 149 bits (74), Expect = 4e-36
Identities = 81/82 (98%), Gaps = 1/82 (1%)
Strand = Plus / Minus
Query: 197 caaattcgacgatcgatttgcacgtcagaaccgctacgagcctccaccagagtttcctct 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 caaattcgacgatcgatttgcacgtcagaaccgctacgagcctccaccagagtttcctct 29
Query: 257 ggcttcaccctattcaggcata 278
|||||||||||||||||||||
Sbjct: 28 -gcttcaccctattcaggcata 8
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.33
Gapped
Lambda K H
1.40 0.714 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1495
Number of Sequences: 1807
Number of extensions: 1495
Number of successful extensions: 28
Number of sequences better than 1.0e-20: 2
length of query: 426
length of database: 10,358,551
effective HSP length: 15
effective length of query: 411
effective length of database: 10,331,446
effective search space: 4246224306
effective search space used: 4246224306
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 49 (99.3 bits)